課程資訊
課程名稱
理論生態學導論
Introduction to Theoretical Ecology 
開課學期
111-1 
授課對象
生命科學院  生態學與演化生物學研究所  
授課教師
柯柏如 
課號
EEB5096 
課程識別碼
B44EU2080 
班次
 
學分
3.0 
全/半年
半年 
必/選修
選修 
上課時間
星期二6,7,8(13:20~16:20) 
上課地點
共207 
備註
本課程以英語授課。
總人數上限:14人 
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課程概述

The development of theory plays an important role in advancing ecology as a scientific field. This three-unit course is for students at the graduate or advanced undergraduate level. The course will cover classic theoretical topics in ecology, starting from single-species dynamics and gradually build up to multispecies models. The course will primarily focus on population and community ecology, but we will also briefly discuss models in epidemiology and ecosystem ecology. Emphasis will be on theoretical concepts and corresponding mathematical approaches.

This course is designed as a two-hour lecture (written on black/white board) followed by a one-hour hands-on practice module. In the lecture, we will analyze dynamical models and discuss their theoretical implications.. In the hands-on practice section, we will use a combination of analytical problem sets, interactive applications, and numerical simulations to gain a general understanding of the dynamics and behavior of different models. 

課程目標
By the end of the course, students are expected to be familiar with the basic building blocks of ecological models and would be able to formulate and analyze simple models of their own. The hands-on practice component should allow students to link their ecological intuition with the underlying mathematical model, helping them to better understand the primary literature of theoretical ecology. 
課程要求
Students are only expected to have a basic understanding of calculus (e.g., freshman introductory course) and Ecology. It's OK if you're not familiar with calculus as we will provide relevant material for you to review during the first week. The final grade consists of: assignment problem sets (60%), midterm exam (15%), final exam (15%), and participation (10%). 
預期每週課後學習時數
 
Office Hours
每週四 14:00~15:00 備註: Please contact the instructor or the TA to arrange discussion 
指定閱讀
 
參考書目
1. A Primer of Ecology (4th edition). Nicholas Gotelli, 2008.
2. An Illustrative Guide to Theoretical Ecology. Ted Case, 2000.
3. A Biologist’s Guide to Mathematical Modeling in Ecology and Evolution. Sarah Otto & Troy Day, 2011.
4. Mathematical Ecology of Populations and Ecosystems. John Pastor, 2008. 
評量方式
(僅供參考)
 
No.
項目
百分比
說明
1. 
Assignment 
60% 
 
2. 
Midterm 
15% 
 
3. 
Final exam 
15% 
 
4. 
Participation 
10% 
 
 
針對學生困難提供學生調整方式
 
上課形式
作業繳交方式
延長作業繳交期限
考試形式
延後期末考試日期(時間)
其他
由師生雙方議定
課程進度
週次
日期
單元主題
第1週
9/6  Introduction: what is theoretical ecology 
第2週
9/13  Exponential population growth 
第3週
9/20  Logistic population growth and stability analysis 
第4週
9/27  Discrete population models 
第5週
10/4  Age-structured population models 
第6週
10/11  Metapopulations and patch occupancy models 
第7週
10/18  Lotka-Volterra model of competition: graphic analysis and invasion analysis 
第8週
10/25  Midterm exam 
第9週
11/1  Lotka-Volterra model of competition: linear stability analysis 
第10週
11/8  Predator-prey interactions (I) 
第11週
11/15  Predator-prey interactions (II) 
第12週
11/22  Mechanistic models for competition: consumer-resource dynamics 
第13週
11/29  Multispecies models of predation: apparent competition 
第14週
12/6  Disease dynamics and SIR models 
第15週
12/13  Research applications: plant-soil feedback as an example 
第16週
12/20  Final exam